PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AL_5E7F93445.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 698aa    MW: 77123.6 Da    PI: 8.5074
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AL_5E7F93445.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.8e-11392420533
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                            k +rr+++NReAAr+sR+RKka+i++Le 
  Traes_4AL_5E7F93445.2 392 KTTRRLAQNREAARKSRLRKKAYIQQLES 420
                            789************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-6388451IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.071390434IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-7391433No hitNo description
PfamPF001703.2E-8392428IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-7393436No hitNo description
PROSITE patternPS000360395410IPR004827Basic-leucine zipper domain
PfamPF141449.2E-30472546IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    Send to blast
GFLTKALQVK TRPLLYYTTF FLLPLSLSSL PFSLSLFTVQ ERDQNKLKQA RRDKILSTVG  60
LASGTHAPHK AGETECLSVR CIKTRSCRVR EEQEEHRTGE RKKERKKRSS RLLCSAQAGL  120
FCAVKPSALK QGSQERKESL YWEWEVEAAR VSAWRSRMEE ASSSSGHPRH RGPPPHHVLG  180
YGGFHAAMAM PTNSMPPAAF FSEQDGGGGS GGAYFGELEE ALMHQVATLS SSGGRMISHS  240
HSQQQTATAT STDHPHRHHH HHHGHNHAMP FPSTVADTAT AAAAAARPPP TLDIFPSWPL  300
ALHHHHTPKQ EGSNVTADST DSESSSKNNI NMDSSDHHQQ QQQQQQGMVG LVTVAGQFHQ  360
ISQQQHHQHQ QQQKMATSST HSDRTGKALD PKTTRRLAQN REAARKSRLR KKAYIQQLES  420
GKLKLAQLEQ DLQRARSQGL LVGGAPGGNS SPGAAMFDVE YNRWLDDDSR RMIELRGGLH  480
AHLPDGDLRA IIDDTLTHYD ELFRLKSAAA RADVFHLITG MWATPAERCF LWMGGFRPSD  540
LLKTLAPQLD PLTEQQMVGI CSLEQSLQQA EEALTQGLEQ LHQSLAITVA GSGSLSDDTN  600
LGSFMGDMAV ALGKLASLEG FVIQADNLRQ QTLHQMHRIL TVRQAARCFL AIGEYHNRLR  660
ALSSLWASRP REILMTDEGN CGELSIAAHP AESQYSAY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3702880.0AK370288.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108D19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014758846.10.0PREDICTED: transcription factor TGA6-like
RefseqXP_003576364.10.0PREDICTED: transcription factor TGA6-like
RefseqXP_014758845.10.0PREDICTED: transcription factor TGA6-like
RefseqXP_014758844.10.0PREDICTED: transcription factor TGA6-like
TrEMBLW5DPI50.0W5DPI5_WHEAT; Uncharacterized protein
STRINGMLOC_17690.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-134bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]